style: apply prefer-node-protocol lint rule (#5627)

it makes it perfectly clear that the package is a Node.js builtin module.

packages/common/y-indexeddb/vite.config.ts

@@ -1,6 +1,6 @@
 import { resolve } from 'node:path';
+import { fileURLToPath } from 'node:url';
 
-import { fileURLToPath } from 'url';
 import { defineConfig } from 'vite';
 import dts from 'vite-plugin-dts';