feat(native): sync yocto codes (#14243)

#### PR Dependency Tree


* **PR #14243** 👈

This tree was auto-generated by
[Charcoal](https://github.com/danerwilliams/charcoal)

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## Summary by CodeRabbit

* **New Features**
* Batch management API for coordinated document mutations and change
tracking.
* New document accessors (IDs, state snapshots, change/delete set
queries) and subscriber count.

* **Chores**
  * Upgraded Rust edition across packages to 2024.
  * Repository-wide formatting, stylistic cleanups and test adjustments.

* **Breaking Changes**
* Removed the Node native bindings package and its JS/TS declarations
and tests (no longer published/available).

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Cargo.toml

@@ -3,7 +3,6 @@ members = [
   "./packages/backend/native",
   "./packages/common/native",
   "./packages/common/y-octo/core",
-  "./packages/common/y-octo/node",
   "./packages/common/y-octo/utils",
   "./packages/frontend/mobile-native",
   "./packages/frontend/native",